The detailed information of tRNA gene sequence


Sequence ID>WENV170004684
Genome IDAHKK01007090
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 1548
End posion on genome 1472
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cgtttgtttT
tRNA gene sequence 
GCTCCGCTGGTGTAGTTCGGCCAAGCATGCGGGCCTCTCGAGCCCACGACCTGGGTTCAA
ATCCCAGGCGGAGCATaa
Downstream region at tRNA end position 
tatgtcatat
Secondary structure (Cloverleaf model)
>WENV170004684	Glu	CTC
                   T      ATaa tatgtcatat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G          T A
                    T     G A C C C     A
    T T G A        G      | | | | |     A
  C         T G T G       C T G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        G     CGAC
                    C   A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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