The detailed information of tRNA gene sequence


Sequence ID>WENV170004694
Genome IDAHKK01007625
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 1082
End posion on genome 1156
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atgaatgatg
tRNA gene sequence 
GGGGTTGTAGGGTAGCTTGGACTATCCTTCGGCGTTCGGGATGCCGAGACCTGAGTTCAA
ATCTCAGCAACCCCAttt
Downstream region at tRNA end position 
tgtcatatta
Secondary structure (Cloverleaf model)
>WENV170004694	Pro	CGG
                   g      Attt tgtcatatta
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    T C G A        A      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    A C T A        T     AGAC
                    C - G
                    G - C
                    G - C
                    C - G
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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