The detailed information of tRNA gene sequence


Sequence ID>WENV170004697
Genome IDAHKK01007659
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 262
End posion on genome 189
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
taataacact
tRNA gene sequence 
GCCTCGGTAGCTTAGCTTGGATGAGCGATTGATTTGTAATCAGTAGGTCGAGGGTTCAAA
TCCCTCCCGAGGCTttc
Downstream region at tRNA end position 
tttgtacgtc
Secondary structure (Cloverleaf model)
>WENV170004697	Thr	TGT
                   t      Tttc tttgtacgtc
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    T       T T C G       G A G G G     C
    T       + | | |                 T T
    G       G A G C
      G A T        G     AGGTC
                    A - T
                    T + G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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