The detailed information of tRNA gene sequence


Sequence ID>WENV170004711
Genome IDAHKK01009040
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 1452
End posion on genome 1537
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagaattag
tRNA gene sequence 
GTCGGGATAGCCAAGAGGTCTAAGGCGGTAGGTTGCTAACCTACTTCCCCTTACGGGGAG
CGAGGGTTCGAATCCCTCTCCCGGCGttt
Downstream region at tRNA end position 
atgctaaact
Secondary structure (Cloverleaf model)
>WENV170004711	Ser	GCT
                   g      Gttt atgctaaact
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     G
    G       A C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TTCCCCTTACGGGGAGC
                    G - C
                    T - A
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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