The detailed information of tRNA gene sequence


Sequence ID>WENV170004723
Genome IDAHKK01009945
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 316
End posion on genome 391
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tatgtagcaT
tRNA gene sequence 
GGGGTCGTGGCCTAGTTTGGAAGGGCAGCGGGCTCCAGACTCGCCGATCGTGTGTTCGAA
TCGCACCGGCCCCATta
Downstream region at tRNA end position 
gtggtaggat
Secondary structure (Cloverleaf model)
>WENV170004723	Trp	CCA
                   T      ATta gtggtaggat
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        G      | | | + |     G
    T       T C C G       G T G T G     C
    T       + | | |                 T T
    G       G G G C
      G A A        A     CGATC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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