The detailed information of tRNA gene sequence


Sequence ID>ENV08001862
Genome IDABOG01045449
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 89
End posion on genome 15
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccggtgatag
tRNA gene sequence 
GCTCCGTTGGTGTAGTCCGGCCAATCATATTGCCCTCTCACGGCAATGACCAGGGTTCAA
ATCCCTGACGGAGCAtct
Downstream region at tRNA end position 
gtgctcgtgt
Secondary structure (Cloverleaf model)
>ENV08001862	Glu	CTC
                   g      Atct gtgctcgtgt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C A G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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