The detailed information of tRNA gene sequence


Sequence ID>WENV170005086
Genome IDAKVG01000030
Search identical group
Phylum/Class[AKVG] hypersaline lake metagenome; aqueous lake water sample, post-0.1 um filtrate containing the viral fraction
Species
Start position on genome 5745
End posion on genome 5819
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aagttatatc
tRNA gene sequence 
GCTCCCTTGGTGTAGTACGGTCAATCATTCAAGATTCTCAGTCTTGAGTCCCGAGTTCAA
ATCTCGGAGGGAGCAtcc
Downstream region at tRNA end position 
tccgtcgtag
Secondary structure (Cloverleaf model)
>WENV170005086	Glu	CTC
                   c      Atcc tccgtcgtag
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G G C T C     A
    A T G A        G      | | | | |     A
  C         T G T G       C C G A G     C
  G           | | +                 T T
  G         T C A T
    T C A A        T     AGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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