The detailed information of tRNA gene sequence


Sequence ID>WENV170005113
Genome IDAKVG01000034
Search identical group
Phylum/Class[AKVG] hypersaline lake metagenome; aqueous lake water sample, post-0.1 um filtrate containing the viral fraction
Species
Start position on genome 12701
End posion on genome 12627
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaaaaataca
tRNA gene sequence 
GGGTTGGTGGTCTAGCACGGTTATGACGCATCCTTGACATGGATGAGAGCGGTGGTTCAA
ATCCGCCCTAACCCAtat
Downstream region at tRNA end position 
ggaaacactt
Secondary structure (Cloverleaf model)
>WENV170005113	Val	GAC
                   a      Atat ggaaacactt
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G + T
                     G - C          T A
                    T     C C G C C     A
    A C G A        G      | | + | |     A
  C         T C T G       G G T G G     C
  G           | | |                 T T
  G         T G A C
    T T A          G     AGAGC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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