The detailed information of tRNA gene sequence


Sequence ID>WENV170005534
Genome IDAMCI01006948
Search identical group
Phylum/Class[AMCI] gut metagenome; fecal sample from gut
Species
Start position on genome 260
End posion on genome 346
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcagcacac
tRNA gene sequence 
GGAGAGATATCGAAGTGGTCATAACGAGGCGGTCTTGAAAACCGTTTGTCCGCAAGGGCG
CGTGGGTTCGAATCCCACTCTCTCCGCtt
Downstream region at tRNA end position 
cgggaaaccg
Secondary structure (Cloverleaf model)
>WENV170005534	Ser	TGA
                   c      GCtt cgggaaaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCGCAAGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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