The detailed information of tRNA gene sequence


Sequence ID>ENV08001867
Genome IDABOG01052888
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 28
End posion on genome 101
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gttgtagcga
tRNA gene sequence 
GGGCCGGTAGCTCAGTCCGGCAGAGCATCTGACTCTTAATCAGACGGTCGCGCGTTCAAA
TCGCGTCCGGCCCGtnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001867	Lys	CTT
                   a      Gtnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C G C     A
      T G A        A      + | | | |     A
    C       C T C G       G C G C G     C
    C       | | | |                 T T
    G       G A G C
      G C A        A     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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