The detailed information of tRNA gene sequence


Sequence ID>WENV170005654
Genome IDAMFO01000059
Search identical group
Phylum/Class[AMFO] microbial mat metagenome; iron biomat sample collected via suction sampling at the Lo'ihi Seamount, Hawai'i, in about
Species
Start position on genome 22650
End posion on genome 22739
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaatcagcca
tRNA gene sequence 
GGAGGGGTCGCATAGTCTGGTCGAGTGCGCGCGTCTCGAAAACGCGTAGGGTTAGCGCCC
TCGAGGGTTCAAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
tagctctcgg
Secondary structure (Cloverleaf model)
>WENV170005654	Ser	CGA
                   a      GCCA tagctctcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAGGGTTAGCGCCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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