The detailed information of tRNA gene sequence


Sequence ID>WENV170005783
Genome IDAMFO01002400
Search identical group
Phylum/Class[AMFO] microbial mat metagenome; iron biomat sample collected via suction sampling at the Lo'ihi Seamount, Hawai'i, in about
Species
Start position on genome 2244
End posion on genome 2320
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aacctgagat
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCACCTGCCTTGGGCGCAGGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tcccgagcag
Secondary structure (Cloverleaf model)
>WENV170005783	Pro	TGG
                   t      ACCA tcccgagcag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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