The detailed information of tRNA gene sequence


Sequence ID>WENV170005923
Genome IDAMQJ01004726
Search identical group
Phylum/Class[AMQJ] sediment metagenome; subsurface aquifer sediment
Species
Start position on genome 62
End posion on genome 138
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaaatattt
tRNA gene sequence 
AGGCGTGTAGCTCCAATGGTTAGAGCATCGGATTCCAAATCCGAGTGATGGGAGTTCGAG
TCTCTCCACGCCTGCCA
Downstream region at tRNA end position 
cattgattat
Secondary structure (Cloverleaf model)
>WENV170005923	Trp	CCA
                   t      GCCA cattgattat
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     C T C T C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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