The detailed information of tRNA gene sequence


Sequence ID>WENV170005934
Genome IDAMQJ01005125
Search identical group
Phylum/Class[AMQJ] sediment metagenome; subsurface aquifer sediment
Species
Start position on genome 456
End posion on genome 543
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttaagcat
tRNA gene sequence 
GGACAGTTGGGAGAGTGGTTTAATCTAGTCGCCTGGAACGCGGCCGTAGCGAAAGTTACC
GAGGGTTCGAATCCCTCACTGTCCACCA
Downstream region at tRNA end position 
caaagcccta
Secondary structure (Cloverleaf model)
>WENV170005934	Ser	GGA
                   t      ACCA caaagcccta
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A G G       G A G G G     C
    G         | | +                 T T
    T       A T C T
      T T A        A     CGTAGCGAAAGTTACC
                    G - C
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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