The detailed information of tRNA gene sequence


Sequence ID>WENV170006078
Genome IDAMQJ01024093
Search identical group
Phylum/Class[AMQJ] sediment metagenome; subsurface aquifer sediment
Species
Start position on genome 185
End posion on genome 272
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagaatatcc
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTCGATGGTGCCTGACTCGAAATCAGGTGTACGGCAACGTACC
TAGGGTTCGAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
ccttacaaaa
Secondary structure (Cloverleaf model)
>WENV170006078	Ser	CGA
                   c      GCCA ccttacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       T A G G G     C
    G       + | |                   T T
    T       T G G T
      C G A        G     TGTACGGCAACGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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