The detailed information of tRNA gene sequence


Sequence ID>ENV08001873
Genome IDABOG01061154
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 76
End posion on genome 2
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gccagtcatc
tRNA gene sequence 
GGGCGGTTAGCTCAGTGGTAGAGCACTGCCTTCACACGGCAGGGGTCACAAGTTCGAACC
TTGTACCGCCCACCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001873	Val	CAC
                   c      ACCA tnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     T G T T C     A
        G A        A      | | | | |     G
      T     C T C G       A C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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