The detailed information of tRNA gene sequence


Sequence ID>WENV170006337
Genome IDAMWB02016837
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 2536
End posion on genome 2631
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaagttctac
tRNA gene sequence 
GGAGAAGGATGGGGCCCGGTGGCTCTCCCGGTCTTCAAAACCGCGTGGTCTCCCCGCCAG
GGGGACGGAAGGTTCGACTCCTTCCCTTCTCCGCCA
Downstream region at tRNA end position 
gatagccgtt
Secondary structure (Cloverleaf model)
>WENV170006337	SeC(p)	TCA
                   c      GCCA gatagccgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     C T T C C     A
      C C C        T      | | | | |     G
    G       G G G G       G A A G G     C
    G       | + | +                 T T
    T       C T C T
      G G          C     GTGGTCTCCCCGCCAGGGGGACG
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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