The detailed information of tRNA gene sequence


Sequence ID>ENV08001876
Genome IDABOG01065617
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 93
End posion on genome 20
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nnnnatacta
tRNA gene sequence 
GCGCTGGTAGTGTAGTGGTATCACGTGACCTTGCCATGGTCACAACCTGGGTTCAAATCC
CAGCCAGCGCATCA
Downstream region at tRNA end position 
ccgtggcgca
Secondary structure (Cloverleaf model)
>ENV08001876	Gly	GCC
                   a      ATCA ccgtggcgca
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G A C C C     A
        G A        A      | | | | |     A
      T     T G T G       C T G G G     C
      G       | | |                 T T
      G     T C A C
        T A        G     CAAC
                    T - A
                    G - C
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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