The detailed information of tRNA gene sequence


Sequence ID>WENV170006762
Genome IDAMWB02049995
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 7339
End posion on genome 7436
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agaagactac
tRNA gene sequence 
GGAAGCACGCGGCTCACTGGTGGGGCCCTCGGACTTCAAATCCGATGTGCGGGGCTGATA
CCCTCGCGGGTGGGTTCGATTCCCATGTGCTTCCGCCA
Downstream region at tRNA end position 
tttttgtaag
Secondary structure (Cloverleaf model)
>WENV170006762	SeC(p)	TCA
                   c      GCCA tttttgtaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    G     T A C C C     A
      C A C        C      + | | | |     G
    T       T C G G       G T G G G     C
    G       + | | |                 T T
    G       G G C C
      T G G        C     TGTGCGGGGCTGATACCCTCGCGG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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