The detailed information of tRNA gene sequence


Sequence ID>WENV170006816
Genome IDAMWB02054021
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 5516
End posion on genome 5425
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcttcgacac
tRNA gene sequence 
GGAAGGGAAGCGTTCCTGGTGGTGCGGCCGGACTTCAAATCCGGTTGGGGGTGTCAGTCG
CTCCCGGGTGGGTTCGACTCCCACTCCCTTCCgcca
Downstream region at tRNA end position 
cttcagcgcc
Secondary structure (Cloverleaf model)
>WENV170006816	SeC(p)	TCA
                   c      gcca cttcagcgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    A     C A C C C     A
      T C C        G      | | | | |     G
    G       T T G C       G T G G G     C
    G         + | |                 T T
    T       T G C G
      G G          G     TTGGGGGTGTCAGTCGCTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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