The detailed information of tRNA gene sequence


Sequence ID>WENV170007268
Genome IDAMWB02101548
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 2
End posion on genome 99
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGAAGCGCCAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGAGGCGCTAATA
ACGTCTCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ccactctttc
Secondary structure (Cloverleaf model)
>WENV170007268	SeC(p)	TCA
                   t      GCCA ccactctttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C   A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGAGGCGCTAATAACGTCTCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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