The detailed information of tRNA gene sequence


Sequence ID>WENV170007584
Genome IDAMWB02142370
Search identical group
Phylum/Class[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
Species
Start position on genome 1803
End posion on genome 1706
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggcgccccac
tRNA gene sequence 
GGAGGCGAATCGGGACTGGTGTTCTGCGCGGTCTTCAAAACCGTTGAGGGGCGTTGAGAG
ACGTCCCTGGTGGGTTCGATTCCCATGCGCCTCCGCCA
Downstream region at tRNA end position 
ctttttccca
Secondary structure (Cloverleaf model)
>WENV170007584	SeC(p)	TCA
                   c      GCCA ctttttccca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   G          T T
                    A     T A C C C     A
      T C A        T      + | | | |     G
    G       G G G C       G T G G G     C
    G       + | + |                 T T
    T       T C T G
      G T          C     TGAGGGGCGTTGAGAGACGTCCCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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