The detailed information of tRNA gene sequence


Sequence ID>WENV170007992
Genome IDAMZC01000011
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 3317
End posion on genome 3232
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taacctctaT
tRNA gene sequence 
GCCGAGGTAGTCTAGTGGTAGGGCGCAAGCCTGGAGAGCTTGTGGGGCTTTGCCCCTCGG
GAGTTCGAATCTCCCCCTCGGCGTCt
Downstream region at tRNA end position 
tactattctt
Secondary structure (Cloverleaf model)
>WENV170007992	Ser	GGA
                   T      GTCt tactattctt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     G
      T     T C T G       G G G A G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGGGCTTTGCCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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