The detailed information of tRNA gene sequence


Sequence ID>WENV170008006
Genome IDAMZC01000115
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 6503
End posion on genome 6409
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgcttaatcc
tRNA gene sequence 
GGGGATGGATGAGCCCCGGTGGGCTTCGCGGTCTTCAAAACCGTTGGCGGGTCGCGTTGC
GGGCCGCGGTGGGTTCGACTCCCATCCATTCCCGCtc
Downstream region at tRNA end position 
gctccagcac
Secondary structure (Cloverleaf model)
>WENV170008006	SeC(p)	TCA
                   c      GCtc gctccagcac
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       C G A G       G T G G G     C
    G       | | | +                 T T
    T       G C T T
      G G          C     TGGCGGGTCGCGTTGCGGGCCGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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