The detailed information of tRNA gene sequence


Sequence ID>WENV170008062
Genome IDAMZC01000940
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 181
End posion on genome 256
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctctatttgt
tRNA gene sequence 
GCCCCTGTAGCTCAGTTGGCAGAGCATATCCATGGTAAGGATAAGGTCAACGGTTCGATT
CCGTTCGGGGGCTCGA
Downstream region at tRNA end position 
attgcatact
Secondary structure (Cloverleaf model)
>WENV170008062	Thr	GGT
                   t      TCGA attgcatact
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    T - A
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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