The detailed information of tRNA gene sequence


Sequence ID>WENV170008085
Genome IDAMZC01001333
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1044
End posion on genome 968
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caaactgagc
tRNA gene sequence 
GGGGACGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGTCGGAGGTCGCGGGTTCGAG
CCCCGTCGTCCCCGCCA
Downstream region at tRNA end position 
ttttcctttc
Secondary structure (Cloverleaf model)
>WENV170008085	Asp	GTC
                   c      GCCA ttttcctttc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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