The detailed information of tRNA gene sequence


Sequence ID>WENV170008093
Genome IDAMZC01001524
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 22562
End posion on genome 22637
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcaggcactt
tRNA gene sequence 
GCCTCTTTAGCTCAGTCGGTAGAGCAGTTCACTCGTAATGAACAGGTCGGGGGTTCAAGT
CCCCCAGGAGGCTCAA
Downstream region at tRNA end position 
aaaaagccgg
Secondary structure (Cloverleaf model)
>WENV170008093	Thr	CGT
                   t      TCAA aaaaagccgg
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     T - A          T G
                    T     C C C C C     A
      T G A        A      | | | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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