The detailed information of tRNA gene sequence


Sequence ID>WENV170008096
Genome IDAMZC01001580
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 2818
End posion on genome 2743
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cccgccagtt
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGCTGTGGGTTCGAGT
CCTACCACCCCTGCCT
Downstream region at tRNA end position 
tctgaactcg
Secondary structure (Cloverleaf model)
>WENV170008096	Trp	CCA
                   t      GCCT tctgaactcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGCT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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