The detailed information of tRNA gene sequence


Sequence ID>WENV170008128
Genome IDAMZC01002549
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 148
End posion on genome 72
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaactatat
tRNA gene sequence 
GGCGAGGTAGCTCAGTCGGTTAGAGCAATGGAATCATAATCCATGTGTCGGGGGTTCGAA
TCCCTCCCTCGCTACTA
Downstream region at tRNA end position 
aaaaagccaa
Secondary structure (Cloverleaf model)
>WENV170008128	Met	CAT
                   t      ACTA aaaaagccaa
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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