The detailed information of tRNA gene sequence


Sequence ID>WENV170008141
Genome IDAMZC01002939
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 2119
End posion on genome 2029
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gttgaaaaac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGCCAAAAGCGT
ATCAAGGGTTCGAATCCCTTTCTCTCCGCAA
Downstream region at tRNA end position 
gaaaagaaac
Secondary structure (Cloverleaf model)
>WENV170008141	Ser	GGA
                   c      GCAA gaaaagaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGCCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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