The detailed information of tRNA gene sequence


Sequence ID>WENV170008156
Genome IDAMZC01003237
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 26741
End posion on genome 26665
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acttttactt
tRNA gene sequence 
GCGCCTATAGCTCAGTCGGTTAGAGCAACTGACTCATAATCAGTAGGTCCCTGGTTCAAG
TCCAGGTGGGCGCACAA
Downstream region at tRNA end position 
aaatgaggcc
Secondary structure (Cloverleaf model)
>WENV170008156	Met	CAT
                   t      ACAA aaatgaggcc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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