The detailed information of tRNA gene sequence


Sequence ID>WENV170008177
Genome IDAMZC01003711
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 4820
End posion on genome 4897
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caattattaa
tRNA gene sequence 
GGGATGTTAGCTCAGCTGGTTTAGAGCGCTACCTTCACACGGTAGAGGTCACAGGTTCGA
ATCCTGTACATCCCACCC
Downstream region at tRNA end position 
cactgagctg
Secondary structure (Cloverleaf model)
>WENV170008177	Val	CAC
                   a      ACCC cactgagctg
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A          T A
                    T     T G T C C     A
    T C G A        A      | | | | |     G
  G         C T C G       A C A G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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