The detailed information of tRNA gene sequence


Sequence ID>WENV170008200
Genome IDAMZC01004373
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 4771
End posion on genome 4847
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcaagcaagc
tRNA gene sequence 
AGGTCCGTAGCTCTAATTGGCAGAGCACCGGACTCCAAATCCGGGGGTTGCAGGTTCGAA
TCCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
gttttaagtg
Secondary structure (Cloverleaf model)
>WENV170008200	Trp	CCA
                   c      GCCA gttttaagtg
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A A T        A      | | | | |     G
    T       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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