The detailed information of tRNA gene sequence


Sequence ID>WENV170008209
Genome IDAMZC01004751
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 314
End posion on genome 239
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgctcttga
tRNA gene sequence 
GGGCCCTTAGCACAATGGTTAGTGCAGCGGACTCATAATCCGTTGGTTGCAGGTTCGAGT
CCTGCAGGGCCCACCA
Downstream region at tRNA end position 
ttcccagttg
Secondary structure (Cloverleaf model)
>WENV170008209	Met	CAT
                   a      ACCA ttcccagttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C A C G       G C A G G     C
    G       | | | |                 T T
    T       G T G C
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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