The detailed information of tRNA gene sequence


Sequence ID>WENV170008212
Genome IDAMZC01004816
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 160
End posion on genome 87
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tctttgcccc
tRNA gene sequence 
AGGGGCTTAGGTTAACGGTAGACCGGCGGTCTCCAAAACCGCGAGTGGGGGTTCGATTCC
CTCAGCCCCTGCCA
Downstream region at tRNA end position 
cttcctccct
Secondary structure (Cloverleaf model)
>WENV170008212	Trp	CCA
                   c      GCCA cttcctccct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A          T T
                    T     C T C C C     A
        A A        A      | + | | |     G
      C     T T G G       G G G G G     C
      G     + | | |                 T T
      G     G A C C
        T A        G     GAGT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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