The detailed information of tRNA gene sequence


Sequence ID>WENV170008236
Genome IDAMZC01005393
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 270
End posion on genome 194
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttgcggccgg
tRNA gene sequence 
CGGGGCGTGGCGCAGTTTGGTAGCGCGGCTGCTTTGGGTGCAGCAGGTCGCAGGTTCGAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
gtcggctcgc
Secondary structure (Cloverleaf model)
>WENV170008236	Pro	TGG
                   g      ACCA gtcggctcgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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