The detailed information of tRNA gene sequence


Sequence ID>WENV170008253
Genome IDAMZC01006163
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 506
End posion on genome 419
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctgatgtga
tRNA gene sequence 
GGAGAGGTGCGAGAGAGGCCGAATCGGGCTCCCTGCTAAGGAGTTGTACCCCTAAAGGGT
ACCGAGGGTTCGAATCCCTCCCTCTCCGgtt
Downstream region at tRNA end position 
tcgtgaggct
Secondary structure (Cloverleaf model)
>WENV170008253	Ser	GCT
                   a      Ggtt tcgtgaggct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGTACCCCTAAAGGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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