The detailed information of tRNA gene sequence


Sequence ID>WENV170008255
Genome IDAMZC01006163
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 326
End posion on genome 238
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttttttatt
tRNA gene sequence 
GGAGAGATGCGAGAGCGGTTGAATCGGGCGGTCTCGAAAACCGTTGAACCCTCTGGGTTC
CGGGGGTTCGAATCCCCCTCTCTCCGCGA
Downstream region at tRNA end position 
gaggaaaccg
Secondary structure (Cloverleaf model)
>WENV170008255	Ser	CGA
                   t      GCGA gaggaaaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGAACCCTCTGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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