The detailed information of tRNA gene sequence


Sequence ID>WENV170008280
Genome IDAMZC01007574
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 3548
End posion on genome 3625
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaaggcagac
tRNA gene sequence 
GGGAGCTTAGCTCAGTTGGTTTAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCGA
CTCCTGTAGCTCCCACCA
Downstream region at tRNA end position 
agtcttcgat
Secondary structure (Cloverleaf model)
>WENV170008280	Val	TAC
                   c      ACCA agtcttcgat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A          T C
                    T     T G T C C     A
    T T G A        A      | | | | |     G
  G         C T C G       A C A G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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