The detailed information of tRNA gene sequence


Sequence ID>WENV170008362
Genome IDAOMP01000351
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 53
End posion on genome 128
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgccgtctgc
tRNA gene sequence 
AGGGCAGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGC
CCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
ttattaaaaa
Secondary structure (Cloverleaf model)
>WENV170008362	Trp	CCA
                   c      GCCA ttattaaaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          C G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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