The detailed information of tRNA gene sequence


Sequence ID>WENV170008391
Genome IDAOMP01001392
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 307
End posion on genome 218
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaatttcac
tRNA gene sequence 
GGAAGCGTGGCAGAGCACGGTTTAATGCACCGGTCTTGAAAACCGGAGGCCAGCAATGGT
CCATGGGTTCAAATCCCATCGCTTCCTCCA
Downstream region at tRNA end position 
atcacgcacg
Secondary structure (Cloverleaf model)
>WENV170008391	Ser	TGA
                   c      TCCA atcacgcacg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T A C C C     A
    A C G A        G      | | | | |     A
  C         G A C G       A T G G G     C
  G           | | |                 T T
  G         A T G C
    T T T A        A     AGGCCAGCAATGGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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