The detailed information of tRNA gene sequence


Sequence ID>WENV170008393
Genome IDAOMP01001405
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 190
End posion on genome 264
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgccacacat
tRNA gene sequence 
AGCGCGGTGGAGTAATGGTTATCTCACTGGTCTCATAAGCCAGGGATACGGGTTCGAGTC
CCGTCTGCGCCACTA
Downstream region at tRNA end position 
tatgcagcgg
Secondary structure (Cloverleaf model)
>WENV170008393	Met	CAT
                   t      ACTA tatgcagcgg
                     A   C
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T
                     G - C          T G
                    T     T G C C C     A
      T A A        G      | | | | |     G
    G       T G A G       A C G G G     C
    G         | | |                 T T
    T       T C T C
      T A          A     GGAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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