The detailed information of tRNA gene sequence


Sequence ID>WENV170008408
Genome IDAOMP01001991
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 202
End posion on genome 278
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtagcactt
tRNA gene sequence 
GGGACTATAGCTCAATTGGTTAGAGCGTCGGACTCATAATCCGTTGGTTCACGGTTCAAG
CCCGTGTGGTCCCACCA
Downstream region at tRNA end position 
attttatatc
Secondary structure (Cloverleaf model)
>WENV170008408	Met	CAT
                   t      ACCA attttatatc
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     A - T          C G
                    T     G T G C C     A
      T A A        A      | | | | |     A
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTT
                    T   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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