The detailed information of tRNA gene sequence


Sequence ID>WENV170008412
Genome IDAOMP01002203
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 713
End posion on genome 619
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caatcaatat
tRNA gene sequence 
GGAAGCTTGGCAGAGCCTGGCTGATTGCACCGGTCTTGAAAACCGGCAGGGGATGAATAG
TCCTTTCCTGGGTTCAAATCCCAGAGCTTCCGCCA
Downstream region at tRNA end position 
attcgtctta
Secondary structure (Cloverleaf model)
>WENV170008412	Ser	TGA
                   t      GCCA attcgtctta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     G A C C C     A
    C C G A        G      | | | | |     A
  T         G A C G       C T G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     CAGGGGATGAATAGTCCTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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