The detailed information of tRNA gene sequence


Sequence ID>WENV170008434
Genome IDAOMP01005485
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 311
End posion on genome 220
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
attttacttt
tRNA gene sequence 
GCTCGGTTAGCTCAACGGTAGAGCAGCAGACTTATACCCTGTAAGGCCCAGATTAGGCCG
TGATGCCGGTTCGAATCCGGCACCGAGTACCA
Downstream region at tRNA end position 
aattaagtag
Secondary structure (Cloverleaf model)
>WENV170008434	Ile	TAT
                   t      ACCA aattaagtag
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C G G C C     A
        A A        A      | | | | |     G
      C     C T C G       G C C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AAGGCCCAGATTAGGCCGTGAT
                    G + T
                    C - G
                    A - T
                    G - C
                    A   C
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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