The detailed information of tRNA gene sequence


Sequence ID>WENV170008435
Genome IDAOMP01005485
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 205
End posion on genome 114
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagtagtatt
tRNA gene sequence 
GGAGAGTTGGCCGAGTCCGGCTTATGGCACTGGTCTTGAAAATCAGCGGGGTGTAAAAGC
CTCCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
aatttattgt
Secondary structure (Cloverleaf model)
>WENV170008435	Ser	TGA
                   t      GCCA aatttattgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G C C G       G T G G G     C
  G         + | | |                 T T
  G         T G G C
    C T T A        A     CGGGGTGTAAAAGCCTCC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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