The detailed information of tRNA gene sequence


Sequence ID>ENV08001896
Genome IDABOJ01011701
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 86
End posion on genome 10
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atttatagta
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAC
TCCGATATTCTCCAACA
Downstream region at tRNA end position 
aaaaataagn
Secondary structure (Cloverleaf model)
>ENV08001896	Ala	TGC
                   a      AACA aaaaataagn
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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