The detailed information of tRNA gene sequence


Sequence ID>WENV170008472
Genome IDAOMQ01000099
Search identical group
Phylum/Class[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 6020
End posion on genome 5947
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acttcgctga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTGTCCCCGCTAacc
Downstream region at tRNA end position 
caggtttttt
Secondary structure (Cloverleaf model)
>WENV170008472	Met	CAT
                   a      Aacc caggtttttt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | + | | |     A
    T       C G A G       A T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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