The detailed information of tRNA gene sequence


Sequence ID>WENV170008534
Genome IDAOMQ01002197
Search identical group
Phylum/Class[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 1224
End posion on genome 1134
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagagtaatt
tRNA gene sequence 
GGAGAGTTGTCAGAGTCCGGCTTATTGTGTTTGCCTCGAAAGCAAAGACCCGTAAAAAGG
TCCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
attacagtaa
Secondary structure (Cloverleaf model)
>WENV170008534	Ser	CGA
                   t      GCCA attacagtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G A C T       G T G G G     C
  G         + | |                   T T
  G         T T G T
    C T T A        G     GACCCGTAAAAAGGTCC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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