The detailed information of tRNA gene sequence


Sequence ID>WENV170008652
Genome IDAOMQ01013596
Search identical group
Phylum/Class[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 99
End posion on genome 188
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatcaactgt
tRNA gene sequence 
GGAAGTGTGGCAGAGCACGGTTAATTGCGCCGTCCTCGAAAGACGGAAGCCAGCAATGGT
TCGCGGGTTCGAATCCCGCCGCTTCCTCCA
Downstream region at tRNA end position 
ttttgcattg
Secondary structure (Cloverleaf model)
>WENV170008652	Ser	CGA
                   t      TCCA ttttgcattg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C G C C C     A
    A C G A        G      | | | | |     G
  C         G A C G       G C G G G     C
  G         + | | |                 T T
  G         T T G C
    T T A A        G     AAGCCAGCAATGGTTC
                    C - G
                    C - G
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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